Graeme Barker

Assistant Professor

Telephone
+44 (0)131 451 8204
Email
graeme.barker@hw.ac.uk
Address
Room G.02
William Perkin Building
Heriot-Watt University
Research

Organic Synthesis and Medicinal Chemistry

Research in the group is divided between two interlinked areas: pioneering new reactions and the development of new medicinal drug molecules.

 

 

 

 

 

1. Organic Synthetic Methodology

This area of our research focuses on the development of novel organic synthetic methodology for assembling structural motifs common in drug-like molecules.  With the development of new reactions, pharmaceutical chemists are able to pursue faster, cheaper and more efficient syntheses of existing drugs.  Our new reactions revolve around utilizing directed metalation to install new substituents onto a molecule: thus, using a group 1 or 2 organometallic reagent, a Lewis-basic directing group directs metalation onto an adjacent position, and the new sustituent (R) is then installed either by electrophilic trapping or via transition metal catalysed cross coupling (figure 1).  Our investigations in this field utilize novel directing groups which are typically installed at a late stage during synthesis.  Thus, the new reactions we develop are amenable for use in late-stage modifications of drug-like molecules, and enable medicinal chemists to rapidly build libraries of lead-compound analogues, a vital process during drug development.

 

 

Figure 1. Directed Metalation-Substitution.

2. Medicinal and Bioorganic Chemistry

We are involved in a number of collaborative projects focused on developing new small molecule ligands for key cellular signalling process enzymes.

2.1    Non-Cyclic Nucleotide Ligands for EPAC1

EPAC1 is a cellular signalling enzyme which mediates downstream biological responses through interaction with the Ras-like GTPases Rap1 and Rap2 in response to the presence of cyclic AMP (cAMP).  Under normal conditions, binding of cAMP induces a conformational change in EPAC1, allowing docking of a Rap protein (figure 2).  While EPAC1 is known to play a role in conditions such as atherosclerosis, insulin resistance and tumour metastasis; drugs based on cAMP suffer from ready metabolism and off target side effects from interaction with EPAC2 and PKA.  In collaboration with Dr Stephen Yarwood and Prof. David Adams, we are developing novel non-cyclic nucleotide small molecule ligands for EPAC1 with both agonist and antagonist properties.

 

 

 

 

 

Figure 2. EPAC1 Activation.

2.2    PTEN Antagonists

PTEN is a tumour-suppresent enzyme which acts by hydrolysing the cellular signalling phospholipid PIP3.  While around 70% of prostrate cancer patients have lost a copy of the gene encoding PTEN, it has been shown that deliberate PTEN suppression can aid axon regrowth following nerve damage (figure 3).  In collaboration with Dr Nick Leslie and Prof. David Adams, we are investigating new PTEN inhibitors with the aim of developing new therapies for spinal cord damage.

 

 

 

 

 

 

Figure 3. Axon Regrowth Expediated by PTEN Suppression.

Selected publications

Up-to-date publications are listed on this research profile.

Biography

Graeme was brought up and attended school in Kirkcaldy before completing an MChem degree at the University of St Andrews, graduating in 2007.  He then moved to the University of York to do a PhD with Prof. Peter O'Brien, investigating new methodologies for the substitution of nitrogen heterocycles using organotlithium complexes.  In 2011, Graeme then moved to a PDRA position at the University of Sheffield under the supervision of Prof. Iain Coldham, investigating the synthesis and use of novel configurationally stable alpha-nitrile organomagnesium species.  Having spent several years in group 1 and 2 organometallic research, in 2013 he moved to another PDRA position at Heriot-Watt University to work on gold(l) catalysis under the supervision of Dr Ai-Lan Lee.  Graeme was appointed to his current position as assistant professor in 2016.  In addition to research and teaching, Graeme sits on the Royal Society of Chemistry Early Careers Network Committee and Scottish Steering Group.

 

Further information

My group website address is http://barkergroup.wordpress.com